Certified Payroll Automation?

We are a specialty contracting construction company that operates multiple companies in 34 states.  A number of the jobs we do require certified payrolls.  We have around 100 custom-form, certified payrolls that we run monthly.  We are using E1 for the certified payroll data but are doing alot  of manual work to format the data into the required forms per the customers requirements.  Does anyone have a way that they have automated certified payrolls into custom forms?